I had a bad bout of food poisoning in October and I had to take a break from everything for three days, and I took a full week after that off most of the strong antimicrobials but not the core protocol while I recovered.
At the time I felt like it set me back, but now I've had more ups and downs I think it might just be that I'd had a couple of good weeks just beforehand.
Perhaps the break will give you a good chance to rest and re-assess treatment since I know you've been going through a difficult time recently. Are there more supportive herbs that you can focus on during the break? Can you keep the immune-modulating ones and the adaptogens?
Bulls eye rash August 2013
Started treating with Buhner herbs July 2017
Treating Borellia, Babesia and Bartonella as of November 2017